NormalizeRPM {ADImpute} | R Documentation |
NormalizeRPM
performs RPM normalization, with possibility
to log the result
NormalizeRPM(data, sce = NULL, log = FALSE, scale = 1, pseudo.count = 1)
data |
matrix; raw data (genes as rows and samples as columns) |
sce |
SingleCellExperiment; raw data |
log |
logical; log RPMs? |
scale |
integer; scale factor to divide RPMs by |
pseudo.count |
numeric; if |
matrix; library size normalized data
demo <- NormalizeRPM(ADImpute::demo_data)