Package to Draw Protein Schematics from Uniprot API output

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Documentation for package ‘drawProteins’ version 1.13.0

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drawProteins drawProteins.
draw_canvas Create ggplot2 object with protein chains from feature database
draw_chains Create ggplot2 object with protein chains from feature database
draw_domains Add protein domains to ggplot2 object.
draw_folding Add regions to ggplot object: alpha-helixes, beta-strands and turns.
draw_motif Add protein motifs sites to ggplot2 object.
draw_phospho Add protein phosphorylation sites to ggplot2 object.
draw_recept_dom Add receptor domains to ggplot2 object.
draw_regions Add protein region sites to ggplot2 object.
draw_repeat Add protein repeats sites to ggplot2 object.
extract_feat_acc Create a dataframe of protein features from JSON object (List of 6)
extract_names Extract protein names into a list
extract_transcripts Create a new dataframe of protein features from dataframe with multiple transcripts separated so that each transcript is drawn separtely with only the appropriate features.
feature_to_dataframe Create a dataframe of protein features from JSON object
five_rel_data Dataframe features of 5 human NFkappaB proteins Uniprot on 1 Nov 2017
five_rel_list Features of five human Rel A proteins
get_features GET features of protein(s) from UniProt API
parse_gff Reformat file or url in gff format to allow to draw
phospho_site_info Create a dataframe of protein features from JSON object
protein_json Uniprot infor human Rel A protein in JSON format
rel_A_features Features of human Rel A protein
rel_json Human Rel A protein features in JSON format
tnfs_data Dataframe features of 2 human TNF receptors from Uniprot on 3 Jan 2018