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| clst-package | Classification by local similarity threshold |
| actino | Actinomyces data set |
| bvseqs | BV reference set. |
| classifier | classify |
| classify | classify |
| classifyIter | classify |
| clst | Classification by local similarity threshold |
| findThreshold | findThreshold |
| partition | findThreshold |
| plotDistances | Visualize results of 'link{findThreshold}' |
| plotMutinfo | Visualize results of 'link{findThreshold}' |
| printClst | Print a summary of the classifier output. |
| pull | classify |
| pullTab | classify |
| scaleDistPlot | Annotated multidimensional scaling plots. |
| strep | Streptococcus data set. |