Smooth modeling of bisulfite sequencing

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Documentation for package ‘SOMNiBUS’ version 1.1.0

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binomRegMethModel A smoothed-EM algorithm to estimate covariate effects and test regional association in Bisulfite Sequencing-derived methylation data
binomRegMethModelPlot Plot the smooth covariate effect
binomRegMethModelPred A smoothed-EM algorithm to estimate covariate effects and test regional association in Bisulfite Sequencing-derived methylation data
binomRegMethModelSim Simulate Bisulfite sequencing data from specified smooth covariate effects
RAdat Methylation data from a rheumatoid arthritis study
RAdat2 A simulated methylation dataset based on a real data.