TCGAMethylation450k

DOI: 10.18129/B9.bioc.TCGAMethylation450k    

This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see TCGAMethylation450k.

The Cancer Genome Atlas Illumina 450k methylation example data

Bioconductor version: 3.13

The Cancer Genome Atlas (TCGA) is applying genomics technologies to over 20 different types of cancer. This package contains a small set of 450k array data in idat format.

Author: Sean Davis

Maintainer: Sean Davis <sdavis2 at mail.nih.gov>

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("TCGAMethylation450k")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual

Details

biocViews	CancerData, ExperimentData, Genome, MethylationArrayData
Version	1.28.0
License	GPL-2
Depends
Imports
LinkingTo
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SystemRequirements
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URL
Depends On Me
Imports Me
Suggests Me	methylumi
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Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	TCGAMethylation450k_1.28.0.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Source Repository	git clone https://git.bioconductor.org/packages/TCGAMethylation450k
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/TCGAMethylation450k
Package Short Url	https://bioconductor.org/packages/TCGAMethylation450k/
Package Downloads Report	Download Stats