ReactomeGSA.data

DOI: 10.18129/B9.bioc.ReactomeGSA.data    

This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see ReactomeGSA.data.

Companion data package for the ReactomeGSA package

Bioconductor version: 3.13

Companion data sets to showcase the functionality of the ReactomeGSA package. This package contains proteomics and RNA-seq data of the melanoma B-cell induction study by Griss et al. and scRNA-seq data from Jerby-Arnon et al.

Author: Johannes Griss [aut, cre]

Maintainer: Johannes Griss <johannes.griss at meduniwien.ac.at>

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ReactomeGSA.data")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual

Details

biocViews	ExperimentData, ExpressionData, Homo_sapiens_Data, Proteome, RNASeqData
Version	1.6.0
License	Artistic-2.0
Depends	R (>= 3.6), limma, edgeR, ReactomeGSA, Seurat
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL	https://github.com/reactome/ReactomeGSA.data/issues
BugReports	https://github.com/reactome/ReactomeGSA.data
Depends On Me
Imports Me
Suggests Me	ReactomeGSA
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	ReactomeGSA.data_1.6.0.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Source Repository	git clone https://git.bioconductor.org/packages/ReactomeGSA.data
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/ReactomeGSA.data
Package Short Url	https://bioconductor.org/packages/ReactomeGSA.data/
Package Downloads Report	Download Stats