ObMiTi

DOI: 10.18129/B9.bioc.ObMiTi    

This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see ObMiTi.

Ob/ob Mice Data on Normal and High Fat Diet

Bioconductor version: 3.13

The package provide RNA-seq count for 2 strains of mus musclus; Wild type and Ob/Ob. Each strain was divided into two groups, and each group received either chow diet or high fat diet. RNA expression was measured after 12 weeks in 7 tissues.

Author: Omar Elashkar [aut, cre] , Mahmoud Ahmed [aut]

Maintainer: Omar Elashkar <omar.i.elashkar at gmail.com>

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ObMiTi")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ObMiTi")

 

HTML	R Script	Using ObMiTi
PDF		Reference Manual
Text		NEWS

Details

biocViews	ExperimentData, ExperimentHub, GEO, RNASeqData
Version	1.0.0
License	GPL-3
Depends	R (>= 4.1), SummarizedExperiment, ExperimentHub
Imports
LinkingTo
Suggests	knitr, rmarkdown, BiocManager, GenomicFeatures, S4Vectors, devtools, testthat
SystemRequirements
Enhances
URL	https://github.com/OmarElAshkar/ObMiTi
BugReports	https://github.com/OmarElAshkar/ObMiTi/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	ObMiTi_1.0.0.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Source Repository	git clone https://git.bioconductor.org/packages/ObMiTi
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/ObMiTi
Package Short Url	https://bioconductor.org/packages/ObMiTi/
Package Downloads Report	Download Stats