simulatorZ

DOI: 10.18129/B9.bioc.simulatorZ    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.13 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see simulatorZ.

Simulator for Collections of Independent Genomic Data Sets

Bioconductor version: 3.13

simulatorZ is a package intended primarily to simulate collections of independent genomic data sets, as well as performing training and validation with predicting algorithms. It supports ExpressionSet and RangedSummarizedExperiment objects.

Author: Yuqing Zhang, Christoph Bernau, Levi Waldron

Maintainer: Yuqing Zhang <zhangyuqing.pkusms at gmail.com>

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("simulatorZ")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual

Details

biocViews	Software, Survival
Version	1.26.0
In Bioconductor since	BioC 3.0 (R-3.1) (7 years)
License	Artistic-2.0
Depends	R (>= 3.5), Biobase, SummarizedExperiment, survival, CoxBoost, BiocGenerics
Imports	graphics, stats, gbm, Hmisc, GenomicRanges, methods
LinkingTo
Suggests	RUnit, BiocStyle, curatedOvarianData, parathyroidSE
SystemRequirements
Enhances
URL	https://github.com/zhangyuqing/simulatorZ
BugReports	https://github.com/zhangyuqing/simulatorZ
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
macOS 10.13 (High Sierra)
Source Repository	git clone https://git.bioconductor.org/packages/simulatorZ
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/simulatorZ
Package Short Url	https://bioconductor.org/packages/simulatorZ/
Package Downloads Report	Download Stats