sampleClassifier

DOI: 10.18129/B9.bioc.sampleClassifier    

This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see sampleClassifier.

Sample Classifier

Bioconductor version: 3.13

The package is designed to classify microarray RNA-seq gene expression profiles.

Author: Khadija El Amrani [aut, cre]

Maintainer: Khadija El Amrani <a.khadija at gmx.de>

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("sampleClassifier")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("sampleClassifier")

 

PDF	R Script	sampleClassifier Vignette
PDF		Reference Manual
Text		NEWS

Details

biocViews	Classification, GeneExpression, ImmunoOncology, Microarray, RNASeq, Software
Version	1.16.0
In Bioconductor since	BioC 3.5 (R-3.4) (4.5 years)
License	Artistic-2.0
Depends	R (>= 4.0), MGFM, MGFR, annotate
Imports	e1071, ggplot2, stats, utils
LinkingTo
Suggests	sampleClassifierData, BiocStyle, hgu133a.db, hgu133plus2.db
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	sampleClassifier_1.16.0.tar.gz
Windows Binary	sampleClassifier_1.16.0.zip
macOS 10.13 (High Sierra)	sampleClassifier_1.16.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/sampleClassifier
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/sampleClassifier
Package Short Url	https://bioconductor.org/packages/sampleClassifier/
Package Downloads Report	Download Stats