geneClassifiers

DOI: 10.18129/B9.bioc.geneClassifiers    

This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see geneClassifiers.

Application of gene classifiers

Bioconductor version: 3.13

This packages aims for easy accessible application of classifiers which have been published in literature using an ExpressionSet as input.

Author: R Kuiper [cre, aut]

Maintainer: R Kuiper <r.kuiper.emc at gmail.com>

Citation (from within R, enter citation("geneClassifiers")):

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("geneClassifiers")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("geneClassifiers")

 

PDF geneClassifiers and missing probesets
PDF R Script geneClassifiers introduction
PDF   Reference Manual
Text   NEWS

Details

biocViews BiomedicalInformatics, Classification, GeneExpression, Microarray, Software, Survival
Version 1.16.0
In Bioconductor since BioC 3.5 (R-3.4) (4.5 years)
License GPL-2
Depends R (>= 3.6.0)
Imports utils, methods, stats, Biobase, BiocGenerics
LinkingTo
Suggests testthat
SystemRequirements
Enhances
URL https://doi.org/doi:10.18129/B9.bioc.geneClassifiers
BugReports https://github.com/rkuiper/geneClassifiers/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package geneClassifiers_1.16.0.tar.gz
Windows Binary geneClassifiers_1.16.0.zip
macOS 10.13 (High Sierra) geneClassifiers_1.16.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/geneClassifiers
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/geneClassifiers
Package Short Url https://bioconductor.org/packages/geneClassifiers/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: