Rnits

DOI: 10.18129/B9.bioc.Rnits    

This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see Rnits.

R Normalization and Inference of Time Series data

Bioconductor version: 3.13

R/Bioconductor package for normalization, curve registration and inference in time course gene expression data.

Author: Dipen P. Sangurdekar <dipen.sangurdekar at gmail.com>

Maintainer: Dipen P. Sangurdekar <dipen.sangurdekar at gmail.com>

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Rnits")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rnits")

 

PDF	R Script	R/Bioconductor package for normalization and differential expression inference in time series gene expression microarray data.
PDF		Reference Manual
Text		NEWS

Details

biocViews	DifferentialExpression, GeneExpression, Microarray, Normalization, Software, TimeCourse
Version	1.26.0
In Bioconductor since	BioC 3.0 (R-3.1) (7 years)
License	GPL-3
Depends	R (>= 3.6.0), Biobase, ggplot2, limma, methods
Imports	affy, boot, impute, splines, graphics, qvalue, reshape2
LinkingTo
Suggests	BiocStyle, knitr, GEOquery, stringr
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	Rnits_1.26.0.tar.gz
Windows Binary	Rnits_1.26.0.zip
macOS 10.13 (High Sierra)	Rnits_1.26.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/Rnits
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/Rnits
Package Short Url	https://bioconductor.org/packages/Rnits/
Package Downloads Report	Download Stats