Omixer

DOI: 10.18129/B9.bioc.Omixer    

This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see Omixer.

Randomize Samples for -omics Profiling

Bioconductor version: 3.13

Omixer - an R package for multivariate and reproducible randomization with lab-friendly sample layouts. Omixer ensures optimal sample distribution across batches with well-documented methods, and can output lab-friendly sample sheets for the wet lab if needed.

Author: Lucy Sinke [cre, aut]

Maintainer: Lucy Sinke <l.j.sinke at lumc.nl>

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Omixer")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Omixer")

 

HTML	R Script	my-vignette
PDF		Reference Manual
Text		NEWS
Text		LICENSE

Details

biocViews	DataRepresentation, ExperimentalDesign, QualityControl, Software, Visualization
Version	1.2.4
In Bioconductor since	BioC 3.12 (R-4.0) (1 year)
License	MIT + file LICENSE
Depends	R (>= 4.0)
Imports	dplyr, ggplot2, forcats, tibble, gridExtra, magrittr, readr, tidyselect, grid, stats, stringr, RColorBrewer
LinkingTo
Suggests	knitr, rmarkdown, BiocStyle, magick, testthat
SystemRequirements
Enhances
URL
BugReports
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	Omixer_1.2.4.tar.gz
Windows Binary	Omixer_1.2.4.zip
macOS 10.13 (High Sierra)	Omixer_1.2.4.tgz
Source Repository	git clone https://git.bioconductor.org/packages/Omixer
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/Omixer
Package Short Url	https://bioconductor.org/packages/Omixer/
Package Downloads Report	Download Stats