MOSim

DOI: 10.18129/B9.bioc.MOSim    

This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see MOSim.

Multi-Omics Simulation (MOSim)

Bioconductor version: 3.13

MOSim package simulates multi-omic experiments that mimic regulatory mechanisms within the cell, allowing flexible experimental design including time course and multiple groups.

Author: Carlos Martínez [cre, aut], Sonia Tarazona [aut]

Maintainer: Carlos Martínez <cmarmir at gmail.com>

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MOSim")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MOSim")

 

PDF	R Script	MOSim
PDF		Reference Manual
Text		NEWS

Details

biocViews	ExperimentalDesign, RNASeq, Software, TimeCourse
Version	1.6.0
In Bioconductor since	BioC 3.10 (R-3.6) (2 years)
License	GPL-3
Depends	R (>= 3.6)
Imports	HiddenMarkov, zoo, methods, matrixStats, dplyr, stringi, lazyeval, rlang, stats, utils, purrr, scales, stringr, tibble, tidyr, ggplot2, Biobase, IRanges, S4Vectors
LinkingTo
Suggests	testthat, knitr, rmarkdown, BiocStyle
SystemRequirements
Enhances
URL	https://github.com/Neurergus/MOSim
BugReports	https://github.com/Neurergus/MOSim/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	MOSim_1.6.0.tar.gz
Windows Binary	MOSim_1.6.0.zip
macOS 10.13 (High Sierra)	MOSim_1.6.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/MOSim
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/MOSim
Package Short Url	https://bioconductor.org/packages/MOSim/
Package Downloads Report	Download Stats