MAIT

DOI: 10.18129/B9.bioc.MAIT    

This package is for version 3.13 of Bioconductor; for the stable, up-to-date release version, see MAIT.

Statistical Analysis of Metabolomic Data

Bioconductor version: 3.13

The MAIT package contains functions to perform end-to-end statistical analysis of LC/MS Metabolomic Data. Special emphasis is put on peak annotation and in modular function design of the functions.

Author: Francesc Fernandez-Albert, Rafael Llorach, Cristina Andres-LaCueva, Alexandre Perera

Maintainer: Pol Sola-Santos <pol.soladelossantos at gmail.com>

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MAIT")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MAIT")

 

PDF	R Script	\maketitleMAIT Vignette
PDF		Reference Manual
Text		NEWS

Details

biocViews	ImmunoOncology, MassSpectrometry, Metabolomics, Software
Version	1.26.0
In Bioconductor since	BioC 3.0 (R-3.1) (7 years)
License	GPL-2
Depends	R (>= 2.10), CAMERA, Rcpp, pls
Imports	gplots, e1071, class, MASS, plsgenomics, agricolae, xcms, methods, caret
LinkingTo
Suggests	faahKO
SystemRequirements
Enhances	rgl
URL
Depends On Me
Imports Me
Suggests Me	specmine
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	MAIT_1.26.0.tar.gz
Windows Binary	MAIT_1.26.0.zip
macOS 10.13 (High Sierra)	MAIT_1.26.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/MAIT
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/MAIT
Package Short Url	https://bioconductor.org/packages/MAIT/
Package Downloads Report	Download Stats