makeBoxPlot,ChrTable,LinkageGroupList-method {contiBAIT} | R Documentation |
makeBoxPlot – creates boxplot of contigs included in the analysis vs those excluded
## S4 method for signature 'ChrTable,LinkageGroupList' makeBoxPlot(chrTable, linkage.contigs)
chrTable |
A GRanges object consisting of contigs and positions. A meta column called 'names' must be present with names in the same format as those from linkage.contigs. Generated by makeChrTable(). |
linkage.contigs |
A list of clustered contigs, generated by clusterContigs() |
a box plot of included and excluded contigs
#make an example barplot of data data("exampleLGList") data("exampleChrTable") makeBoxPlot(exampleChrTable, exampleLGList)