Package: BioCor
Title: Functional similarities
Version: 1.16.0
Authors@R: 
    c(person(given = "Lluís",
             family = "Revilla Sancho",
             role = c("aut", "cre"),
             email = "lluis.revilla@gmail.com",
             comment = c(ORCID = "0000-0001-9747-2570")),
      person(given = "Pau",
             family = "Sancho-Bru",
             role = "ths",
             comment = c(ORCID = "0000-0001-5569-9259")),
      person(given = "Juan José Salvatella",
             family = "Lozano",
             role = "ths",
             comment = c(ORCID = "0000-0001-7613-3908")))
Description: Calculates functional similarities based on the
    pathways described on KEGG and REACTOME or in gene sets. These
    similarities can be calculated for pathways or gene sets, genes, or
    clusters and combined with other similarities. They can be used to
    improve networks, gene selection, testing relationships...
License: MIT + file LICENSE
URL: https://llrs.github.io/BioCor/
BugReports: https://github.com/llrs/BioCor/issues
Depends: R (>= 3.4.0)
Imports: BiocParallel, Matrix, methods, GSEABase
Suggests: reactome.db, org.Hs.eg.db, WGCNA, GOSemSim, testthat, knitr,
        rmarkdown, BiocStyle, airway, DESeq2, boot,
        targetscan.Hs.eg.db, Hmisc, spelling
VignetteBuilder: knitr
biocViews: StatisticalMethod, Clustering, GeneExpression, Network,
        Pathways, NetworkEnrichment, SystemsBiology
Encoding: UTF-8
Language: en-US
RoxygenNote: 7.1.1
git_url: https://git.bioconductor.org/packages/BioCor
git_branch: RELEASE_3_13
git_last_commit: 8b830d8
git_last_commit_date: 2021-05-19
Date/Publication: 2021-05-19
NeedsCompilation: no
Packaged: 2021-05-19 22:33:18 UTC; biocbuild
Author: Lluís Revilla Sancho [aut, cre]
    (<https://orcid.org/0000-0001-9747-2570>),
  Pau Sancho-Bru [ths] (<https://orcid.org/0000-0001-5569-9259>),
  Juan José Salvatella Lozano [ths]
    (<https://orcid.org/0000-0001-7613-3908>)
Maintainer: Lluís Revilla Sancho <lluis.revilla@gmail.com>
Built: R 4.1.0; ; 2021-05-20 13:26:25 UTC; unix
