BSgenome.Athaliana.TAIR.TAIR10.1

DOI: 10.18129/B9.bioc.BSgenome.Athaliana.TAIR.TAIR10.1    

This is the development version of BSgenome.Athaliana.TAIR.TAIR10.1; to use it, please install the devel version of Bioconductor.

Full genome sequences for Arabidopsis thaliana (TAIR10.1)

Bioconductor version: Development (3.12)

Full genome sequences for Arabidopsis thaliana as provided by TAIR (TAIR10.1, RefSeq assembly accession: GCF_000001735.4) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BSgenome.Athaliana.TAIR.TAIR10.1")):

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("BSgenome.Athaliana.TAIR.TAIR10.1")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, Arabidopsis_thaliana, BSgenome, Genetics
Version 1.5.0
License Artistic-2.0
Depends R (>= 3.5.0), BSgenome(>= 1.57.1)
Imports BSgenome
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BSgenome.Athaliana.TAIR.TAIR10.1_1.5.0.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Package Short Url https://bioconductor.org/packages/BSgenome.Athaliana.TAIR.TAIR10.1/
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