wpm

DOI: 10.18129/B9.bioc.wpm    

This package is for version 3.12 of Bioconductor; for the stable, up-to-date release version, see wpm.

Well Plate Maker

Bioconductor version: 3.12

This is a shiny application for creating well-plate plans. It uses a backtracking-inspired algorithm to place samples on plates based on specific neighborhood constraints.

Author: Helene Borges [aut, cre], Thomas Burger [aut]

Maintainer: Helene Borges <borges.helene.sophie at gmail.com>

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("wpm")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("wpm")

 

HTML	R Script	How to use Well Plate Maker
PDF		Reference Manual
Text		NEWS

Details

biocViews	BatchEffect, ExperimentalDesign, GUI, MassSpectrometry, Proteomics, Software
Version	1.0.0
In Bioconductor since	BioC 3.12 (R-4.0) (0.5 years)
License	Artistic-2.0
Depends	R (>= 4.0.0)
Imports	utils, methods, cli, Biobase, SummarizedExperiment, config, golem, shiny, DT, ggplot2, dplyr, rlang, stringr, shinydashboard, shinyWidgets, shinycustomloader, RColorBrewer, logging
LinkingTo
Suggests	MSnbase, testthat, BiocStyle, knitr, rmarkdown
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	wpm_1.0.0.tar.gz
Windows Binary	wpm_1.0.0.zip
macOS 10.13 (High Sierra)	wpm_1.0.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/wpm
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/wpm
Package Short Url	https://bioconductor.org/packages/wpm/
Package Downloads Report	Download Stats