DOI: 10.18129/B9.bioc.sigaR    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.12 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see sigaR.

Statistics for Integrative Genomics Analyses in R

Bioconductor version: 3.12

Facilitates the joint analysis of high-throughput data from multiple molecular levels. Contains functions for manipulation of objects, various analysis types, and some visualization.

Author: Wessel N. van Wieringen <w.vanwieringen at>

Maintainer: Wessel N. van Wieringen <w.vanwieringen at>

Citation (from within R, enter citation("sigaR")):


To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


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biocViews DifferentialExpression, GeneExpression, Microarray, Pathways, Software, aCGH
Version 1.38.0
In Bioconductor since BioC 2.10 (R-2.15) (9 years)
License GPL (>= 2)
Depends Biobase, CGHbase, methods, mvtnorm
Imports corpcor (>= 1.6.2), graphics, igraph, limma, marray, MASS, penalized, quadprog, snowfall, stats
Suggests CGHcall
Depends On Me
Imports Me
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