occugene

DOI: 10.18129/B9.bioc.occugene    

This package is for version 3.12 of Bioconductor; for the stable, up-to-date release version, see occugene.

Functions for Multinomial Occupancy Distribution

Bioconductor version: 3.12

Statistical tools for building random mutagenesis libraries for prokaryotes. The package has functions for handling the occupancy distribution for a multinomial and for estimating the number of essential genes in random transposon mutagenesis libraries.

Author: Oliver Will <oliverrreader at gmail.com>

Maintainer: Oliver Will <oliverrreader at gmail.com>

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("occugene")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("occugene")

 

PDF	R Script	occugene
PDF		Reference Manual

Details

biocViews	Annotation, Pathways, Software
Version	1.50.0
In Bioconductor since	BioC 2.2 (R-2.7) (13 years)
License	GPL (>= 2)
Depends	R (>= 2.0.0)
Imports
LinkingTo
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SystemRequirements
Enhances
URL
Depends On Me
Imports Me
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Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	occugene_1.50.0.tar.gz
Windows Binary	occugene_1.50.0.zip
macOS 10.13 (High Sierra)	occugene_1.50.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/occugene
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/occugene
Package Short Url	https://bioconductor.org/packages/occugene/
Package Downloads Report	Download Stats