DOI: 10.18129/B9.bioc.metaMS    

This package is for version 3.12 of Bioconductor; for the stable, up-to-date release version, see metaMS.

MS-based metabolomics annotation pipeline

Bioconductor version: 3.12

MS-based metabolomics data processing and compound annotation pipeline.

Author: Ron Wehrens [aut] (author of GC-MS part, Initial Maintainer), Pietro Franceschi [aut] (author of LC-MS part), Nir Shahaf [ctb], Matthias Scholz [ctb], Georg Weingart [ctb] (development of GC-MS approach), Elisabete Carvalho [ctb] (testing and feedback of GC-MS pipeline), Yann Guitton [ctb, cre] , Julien Saint-Vanne [ctb]

Maintainer: Yann Guitton <yann.guitton at>

Citation (from within R, enter citation("metaMS")):


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if (!requireNamespace("BiocManager", quietly = TRUE))


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PDF R Script runGC
PDF R Script runLC
PDF   Reference Manual
Text   NEWS


biocViews ImmunoOncology, MassSpectrometry, Metabolomics, Software
Version 1.26.0
In Bioconductor since BioC 2.14 (R-3.1) (7 years)
License GPL (>= 2)
Depends R (>= 4.0), methods, CAMERA, xcms(>= 1.35)
Imports Matrix, tools, robustbase, BiocGenerics, graphics, stats, utils
Suggests metaMSdata, RUnit
Depends On Me
Imports Me
Suggests Me CluMSID
Links To Me
Build Report  

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