DOI: 10.18129/B9.bioc.adaptest    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.12 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see adaptest.

Data-Adaptive Statistics for High-Dimensional Multiple Testing

Bioconductor version: 3.12

Data-adaptive test statistics represent a general methodology for performing multiple hypothesis testing on effects sizes while maintaining honest statistical inference when operating in high-dimensional settings (). The utilities provided here extend the use of this general methodology to many common data analytic challenges that arise in modern computational and genomic biology.

Author: Weixin Cai <wcai at>, Nima Hejazi <nh at>, Alan Hubbard <hubbard at berkeley>

Maintainer: Weixin Cai <wcai at>

Citation (from within R, enter citation("adaptest")):


To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


PDF   Reference Manual


biocViews DifferentialExpression, DimensionReduction, GeneExpression, Genetics, Microarray, MultipleComparison, Regression, Sequencing, Software
Version 1.10.0
In Bioconductor since BioC 3.7 (R-3.5) (3 years)
License GPL-2
Depends R (>= 3.6.0)
Imports methods, graphics, stats, utils, calibrate, origami (>= 1.0.0), SummarizedExperiment, S4Vectors, tmle
Suggests Matrix, testthat, rmarkdown, knitr, BiocStyle, SuperLearner, earth, gam, nnls, airway
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
macOS 10.13 (High Sierra)
Source Repository git clone
Source Repository (Developer Access) git clone
Package Short Url
Package Downloads Report Download Stats

Documentation »


R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: