DOI: 10.18129/B9.bioc.Rtpca    

This package is for version 3.12 of Bioconductor; for the stable, up-to-date release version, see Rtpca.

Thermal proximity co-aggregation with R

Bioconductor version: 3.12

R package for performing thermal proximity co-aggregation analysis with thermal proteome profiling datasets to analyse protein complex assembly and (differential) protein-protein interactions across conditions.

Author: Nils Kurzawa [aut, cre], André Mateus [aut], Mikhail M. Savitski [aut]

Maintainer: Nils Kurzawa <nils.kurzawa at embl.de>

Citation (from within R, enter citation("Rtpca")):


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biocViews DataImport, Proteomics, Software
Version 1.0.0
In Bioconductor since BioC 3.12 (R-4.0) (0.5 years)
License GPL-3
Depends R (>= 4.0.0), stats, dplyr, tidyr
Imports Biobase, methods, ggplot2, pROC, fdrtool, splines, utils, tibble
Suggests knitr, BiocStyle, TPP, testthat
BugReports https://support.bioconductor.org/
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Source Package Rtpca_1.0.0.tar.gz
Windows Binary Rtpca_1.0.0.zip
macOS 10.13 (High Sierra) Rtpca_1.0.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/Rtpca
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Package Short Url https://bioconductor.org/packages/Rtpca/
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