Mirsynergy

DOI: 10.18129/B9.bioc.Mirsynergy    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.12 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see Mirsynergy.

Mirsynergy

Bioconductor version: 3.12

Detect synergistic miRNA regulatory modules by overlapping neighbourhood expansion.

Author: Yue Li

Maintainer: Yue Li <yueli at cs.toronto.edu>

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Mirsynergy")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual

Details

biocViews	Clustering, Software
Version	1.26.0
In Bioconductor since	BioC 2.14 (R-3.1) (7 years)
License	GPL-2
Depends	R (>= 3.0.2), igraph, ggplot2
Imports	graphics, grDevices, gridExtra, Matrix, parallel, RColorBrewer, reshape, scales, utils
LinkingTo
Suggests	glmnet, RUnit, BiocGenerics, knitr
SystemRequirements
Enhances
URL	http://www.cs.utoronto.ca/~yueli/Mirsynergy.html
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
macOS 10.13 (High Sierra)
Source Repository	git clone https://git.bioconductor.org/packages/Mirsynergy
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/Mirsynergy
Package Short Url	https://bioconductor.org/packages/Mirsynergy/
Package Downloads Report	Download Stats