DOI: 10.18129/B9.bioc.BiocSklearn    

This package is for version 3.12 of Bioconductor; for the stable, up-to-date release version, see BiocSklearn.

interface to python sklearn via Rstudio reticulate

Bioconductor version: 3.12

This package provides interfaces to selected sklearn elements, and demonstrates fault tolerant use of python modules requiring extensive iteration.

Author: Vince Carey

Maintainer: VJ Carey <stvjc at>

Citation (from within R, enter citation("BiocSklearn")):


To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))


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biocViews DimensionReduction, Infrastructure, Software, StatisticalMethod
Version 1.12.0
In Bioconductor since BioC 3.6 (R-3.4) (3.5 years)
License Artistic-2.0
Depends R (>= 3.5.0), reticulate, methods, SummarizedExperiment, knitr
Imports basilisk, Rcpp
Suggests testthat, restfulSE, HDF5Array, BiocStyle
SystemRequirements python (>= 2.7), sklearn, numpy, pandas, h5py
Depends On Me
Imports Me
Suggests Me
Links To Me
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Source Package BiocSklearn_1.12.0.tar.gz
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macOS 10.13 (High Sierra) BiocSklearn_1.12.0.tgz
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