BioSeqClass

DOI: 10.18129/B9.bioc.BioSeqClass    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.12 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see BioSeqClass.

Classification for Biological Sequences

Bioconductor version: 3.12

Extracting Features from Biological Sequences and Building Classification Model

Author: Li Hong sysptm@gmail.com

Maintainer: Li Hong <sysptm at gmail.com>

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BioSeqClass")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual

Details

biocViews	Classification, Software
Version	1.48.0
In Bioconductor since	BioC 2.5 (R-2.10) (11.5 years)
License	LGPL (>= 2.0)
Depends	R (>= 2.10), scatterplot3d
Imports	Biostrings, ipred, e1071, klaR, randomForest, class, tree, nnet, rpart, party, foreign, Biobase, utils, stats, grDevices
LinkingTo
Suggests	scatterplot3d
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
macOS 10.13 (High Sierra)
Source Repository	git clone https://git.bioconductor.org/packages/BioSeqClass
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/BioSeqClass
Package Short Url	https://bioconductor.org/packages/BioSeqClass/
Package Downloads Report	Download Stats