Interface to the RDP Classifier

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Documentation for package ‘rRDP’ version 1.24.0

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accuracy Calculate Classification Accuracy
confusionTable Calculate Classification Accuracy
decode_Greengenes Decoding and Encoding Phylogenetic Classification Annotations
decode_RDP Decoding and Encoding Phylogenetic Classification Annotations
encode_Greengenes Decoding and Encoding Phylogenetic Classification Annotations
encode_RDP Decoding and Encoding Phylogenetic Classification Annotations
GenClass16S Decoding and Encoding Phylogenetic Classification Annotations
predict Ribosomal Database Project (RDP) Classifier for 16S rRNA
predict.RDPClassifier Ribosomal Database Project (RDP) Classifier for 16S rRNA
print.RDPClassifier Ribosomal Database Project (RDP) Classifier for 16S rRNA
rdp Ribosomal Database Project (RDP) Classifier for 16S rRNA
removeRDP Ribosomal Database Project (RDP) Classifier for 16S rRNA
trainRDP Ribosomal Database Project (RDP) Classifier for 16S rRNA