AggregatedDotPlot | The AggregatedDotPlot class |
AggregatedDotPlot-class | The AggregatedDotPlot class |
createGeneSetCommands | Create gene set commands |
DifferentialStatisticsTable | Dynamic marker table |
DynamicMarkerTable | Dynamic marker table |
DynamicMarkerTable-class | Dynamic marker table |
DynamicReducedDimensionPlot | Dynamic reduced dimension plot |
DynamicReducedDimensionPlot-class | Dynamic reduced dimension plot |
FeatureSetTable | Feature set table |
FeatureSetTable-class | Feature set table |
GeneSetTable | Gene set table |
GeneSetTable-class | Gene set table |
getAveAbPattern | Global DE prefixes |
getFeatureSetCommands | Global feature set commands |
getLogFCPattern | Global DE prefixes |
getPValuePattern | Global DE prefixes |
getTableExtraFields | Global extra table fields |
initialize-method | The AggregatedDotPlot class |
initialize-method | Dynamic marker table |
initialize-method | Dynamic reduced dimension plot |
initialize-method | Feature set table |
initialize-method | Gene set table |
initialize-method | The LogFCLogFCPlot class |
initialize-method | The MAPlot class |
initialize-method | The ReducedDimensionHexPlot class |
initialize-method | The VolcanoPlot class |
LogFCLogFCPlot | The LogFCLogFCPlot class |
LogFCLogFCPlot-class | The LogFCLogFCPlot class |
MAPlot | The MAPlot class |
MAPlot-class | The MAPlot class |
modeEmpty | App pre-configured to launch with no visible panel |
modeGating | App pre-configured to link multiple feature assay plots |
modeReducedDim | App pre-configured to compare multiple reduced dimension plots |
ReducedDimensionHexPlot | The ReducedDimensionHexPlot class |
ReducedDimensionHexPlot-class | The ReducedDimensionHexPlot class |
setAveAbPattern | Global DE prefixes |
setFeatureSetCommands | Global feature set commands |
setLogFCPattern | Global DE prefixes |
setPValuePattern | Global DE prefixes |
setTableExtraFields | Global extra table fields |
utils-de | Acceptable fields for DE panels |
utils-geneset | Gene set utilities |
VolcanoPlot | The VolcanoPlot class |
VolcanoPlot-class | The VolcanoPlot class |
.allowableXAxisChoices-method | The LogFCLogFCPlot class |
.allowableXAxisChoices-method | The MAPlot class |
.allowableXAxisChoices-method | The VolcanoPlot class |
.allowableYAxisChoices-method | The LogFCLogFCPlot class |
.allowableYAxisChoices-method | The MAPlot class |
.allowableYAxisChoices-method | The VolcanoPlot class |
.cacheCommonInfo-method | The AggregatedDotPlot class |
.cacheCommonInfo-method | Dynamic marker table |
.cacheCommonInfo-method | Dynamic reduced dimension plot |
.cacheCommonInfo-method | Feature set table |
.cacheCommonInfo-method | The LogFCLogFCPlot class |
.cacheCommonInfo-method | The MAPlot class |
.cacheCommonInfo-method | The ReducedDimensionHexPlot class |
.cacheCommonInfo-method | The VolcanoPlot class |
.colorByNoneDotPlotField-method | The LogFCLogFCPlot class |
.colorByNoneDotPlotField-method | The MAPlot class |
.colorByNoneDotPlotField-method | The VolcanoPlot class |
.colorByNoneDotPlotScale-method | The LogFCLogFCPlot class |
.colorByNoneDotPlotScale-method | The MAPlot class |
.colorByNoneDotPlotScale-method | The VolcanoPlot class |
.createObservers-method | The AggregatedDotPlot class |
.createObservers-method | Dynamic marker table |
.createObservers-method | Dynamic reduced dimension plot |
.createObservers-method | Feature set table |
.createObservers-method | Gene set table |
.createObservers-method | The LogFCLogFCPlot class |
.createObservers-method | The MAPlot class |
.createObservers-method | The ReducedDimensionHexPlot class |
.createObservers-method | The VolcanoPlot class |
.defineDataInterface-method | The AggregatedDotPlot class |
.defineDataInterface-method | Dynamic marker table |
.defineDataInterface-method | Dynamic reduced dimension plot |
.defineDataInterface-method | Feature set table |
.defineDataInterface-method | Gene set table |
.defineDataInterface-method | The LogFCLogFCPlot class |
.defineDataInterface-method | The MAPlot class |
.defineDataInterface-method | The VolcanoPlot class |
.defineInterface-method | The AggregatedDotPlot class |
.defineOutput-method | The AggregatedDotPlot class |
.defineOutput-method | Feature set table |
.defineOutput-method | Gene set table |
.definePanelTour-method | The AggregatedDotPlot class |
.definePanelTour-method | Dynamic marker table |
.definePanelTour-method | Dynamic reduced dimension plot |
.definePanelTour-method | Feature set table |
.definePanelTour-method | The LogFCLogFCPlot class |
.definePanelTour-method | The MAPlot class |
.definePanelTour-method | The ReducedDimensionHexPlot class |
.definePanelTour-method | The VolcanoPlot class |
.defineVisualOtherInterface-method | The ReducedDimensionHexPlot class |
.defineVisualShapeInterface-method | The ReducedDimensionHexPlot class |
.defineVisualSizeInterface-method | The ReducedDimensionHexPlot class |
.exportOutput-method | The AggregatedDotPlot class |
.fullName-method | The AggregatedDotPlot class |
.fullName-method | Dynamic marker table |
.fullName-method | Dynamic reduced dimension plot |
.fullName-method | Feature set table |
.fullName-method | Gene set table |
.fullName-method | The LogFCLogFCPlot class |
.fullName-method | The MAPlot class |
.fullName-method | The ReducedDimensionHexPlot class |
.fullName-method | The VolcanoPlot class |
.generateDotPlot-method | The LogFCLogFCPlot class |
.generateDotPlot-method | The MAPlot class |
.generateDotPlot-method | The ReducedDimensionHexPlot class |
.generateDotPlot-method | The VolcanoPlot class |
.generateDotPlotData-method | Dynamic reduced dimension plot |
.generateDotPlotData-method | The LogFCLogFCPlot class |
.generateDotPlotData-method | The MAPlot class |
.generateDotPlotData-method | The VolcanoPlot class |
.generateOutput-method | The AggregatedDotPlot class |
.generateOutput-method | Feature set table |
.generateOutput-method | Gene set table |
.generateTable-method | Dynamic marker table |
.getAcceptableAveAbFields | Acceptable fields for DE panels |
.getAcceptableLogFCFields | Acceptable fields for DE panels |
.getAcceptablePValueFields | Acceptable fields for DE panels |
.getGeneSetCommands | Gene set utilities |
.getIdentifierType | Gene set utilities |
.getOrganism | Gene set utilities |
.hideInterface-method | The AggregatedDotPlot class |
.hideInterface-method | Dynamic marker table |
.hideInterface-method | Feature set table |
.hideInterface-method | Gene set table |
.hideInterface-method | The LogFCLogFCPlot class |
.hideInterface-method | The MAPlot class |
.hideInterface-method | The ReducedDimensionHexPlot class |
.hideInterface-method | The VolcanoPlot class |
.multiSelectionActive-method | Feature set table |
.multiSelectionActive-method | Gene set table |
.multiSelectionAvailable-method | Feature set table |
.multiSelectionAvailable-method | Gene set table |
.multiSelectionClear-method | Feature set table |
.multiSelectionClear-method | Gene set table |
.multiSelectionCommands-method | Feature set table |
.multiSelectionCommands-method | Gene set table |
.multiSelectionDimension-method | Feature set table |
.multiSelectionDimension-method | Gene set table |
.multiSelectionInvalidated-method | Dynamic marker table |
.multiSelectionInvalidated-method | Dynamic reduced dimension plot |
.panelColor-method | The AggregatedDotPlot class |
.panelColor-method | Dynamic marker table |
.panelColor-method | Dynamic reduced dimension plot |
.panelColor-method | Feature set table |
.panelColor-method | Gene set table |
.panelColor-method | The LogFCLogFCPlot class |
.panelColor-method | The MAPlot class |
.panelColor-method | The ReducedDimensionHexPlot class |
.panelColor-method | The VolcanoPlot class |
.prioritizeDotPlotData-method | The LogFCLogFCPlot class |
.prioritizeDotPlotData-method | The MAPlot class |
.prioritizeDotPlotData-method | The VolcanoPlot class |
.refineParameters-method | The AggregatedDotPlot class |
.refineParameters-method | Dynamic marker table |
.refineParameters-method | Dynamic reduced dimension plot |
.refineParameters-method | Feature set table |
.refineParameters-method | The LogFCLogFCPlot class |
.refineParameters-method | The MAPlot class |
.refineParameters-method | The VolcanoPlot class |
.renderOutput-method | The AggregatedDotPlot class |
.renderOutput-method | Feature set table |
.renderOutput-method | Gene set table |
.setAcceptableAveAbFields | Acceptable fields for DE panels |
.setAcceptableLogFCFields | Acceptable fields for DE panels |
.setAcceptablePValueFields | Acceptable fields for DE panels |
.setGeneSetCommands | Gene set utilities |
.setIdentifierType | Gene set utilities |
.setOrganism | Gene set utilities |