gprege-package |
gprege - Gaussian Process Ranking and Estimation of Gene Expression. |
compareROC |
Make ROC plots. |
demTp63Gp1 |
gprege on TP63 expression time-series. |
DGatta_labels_byTSNI |
Fragment dataset of 13 time-point mouse microarray time series of gene expression ratios and and a ranking list of TP63 targets suggested by TSNI. |
DGatta_labels_byTSNItop100 |
Fragment dataset of 13 time-point mouse microarray time series of gene expression ratios and and a ranking list of TP63 targets suggested by TSNI. |
DGdat_p63_case1_GL |
BATS rankings (Angelini, 2007) Case 1: Delta error prior Case 2: Inverse Gamma error prior Case 3: Double Exponential error prior |
DGdat_p63_case2_GL |
BATS rankings (Angelini, 2007) Case 1: Delta error prior Case 2: Inverse Gamma error prior Case 3: Double Exponential error prior |
DGdat_p63_case3_GL |
BATS rankings (Angelini, 2007) Case 1: Delta error prior Case 2: Inverse Gamma error prior Case 3: Double Exponential error prior |
exhaustivePlot |
Plot of the LML function by exhaustive search. |
exprs_tp63_RMA |
Fragment dataset of 13 time-point mouse microarray time series of gene expression ratios and and a ranking list of TP63 targets suggested by TSNI. |
FragmentDellaGattaData |
Fragment dataset of 13 time-point mouse microarray time series of gene expression ratios and and a ranking list of TP63 targets suggested by TSNI. |
genesymbols |
Fragment dataset of 13 time-point mouse microarray time series of gene expression ratios and and a ranking list of TP63 targets suggested by TSNI. |
gprege |
Gaussian process ranking and estimation of gene expression time-series |
gpregeOutput |
Fragment dataset of 13 time-point mouse microarray time series of gene expression ratios and and a ranking list of TP63 targets suggested by TSNI. |
rocStats |
Make ROC curve data. |