Analyze flow cytometer data to determine sample ploidy


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Documentation for package ‘flowPloidy’ version 1.16.0

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flowPloidy-package flowPloidy: A package for analyzing Flow Cytometry Histograms
addComponents Building Flow Histogram Models
batchFlowHist FlowHist
browseFlowHist browseFlowHist
dropComponents Building Flow Histogram Models
fhAccessors FlowHist Accessors
fhAnalyze fhAnalyze
fhAnnotation FlowHist Accessors
fhArgs FlowHist Accessors
fhBins FlowHist Accessors
fhChannel FlowHist Accessors
fhComps FlowHist Accessors
fhCounts FlowHist Accessors
fhCV FlowHist Accessors
fhDebris FlowHist Accessors
fhFail FlowHist Accessors
fhFile FlowHist Accessors
fhG2 FlowHist Accessors
fhGate FlowHist Accessors
fhHistData FlowHist Accessors
fhInit FlowHist Accessors
fhLimits FlowHist Accessors
fhLinearity FlowHist Accessors
fhModel FlowHist Accessors
fhModels Building Flow Histogram Models
fhNLS FlowHist Accessors
fhOpts FlowHist Accessors
fhPeaks FlowHist Accessors
fhRaw FlowHist Accessors
fhRCS FlowHist Accessors
fhSamples FlowHist Accessors
fhSpecialParams FlowHist Accessors
fhStandards FlowHist Accessors
fhStdPeak FlowHist Accessors
fhStdSelected FlowHist Accessors
fhStdSizes FlowHist Accessors
FlowHist FlowHist
flowModels Building Flow Histogram Models
flowPloidy flowPloidy: A package for analyzing Flow Cytometry Histograms
FlowStandards An S4 class to represent internal standard details for 'FlowHist' objects
gauss Gaussian model components
GaussianComponents Gaussian model components
makeModel Building Flow Histogram Models
ModelComponent An S4 class to represent model components
pickInit Interactively select model starting values
plot.FlowHist Plot histograms for FlowHist objects
plotFH Plot the raw data for a FlowHist object
setBins setBins
setLimits Building Flow Histogram Models
stdPeak An S4 class to represent internal standard details for 'FlowHist' objects
stdSelected An S4 class to represent internal standard details for 'FlowHist' objects
stdSizes An S4 class to represent internal standard details for 'FlowHist' objects
tabulateFlowHist exportFlowHist
updateFlowHist updateFlowHist
viewFlowChannels viewFlowChannels