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| BeadChip-class | Class '"BeadChip"' |
| BeadChip96ToMSA4MAP | Class '"MSAroboticPlate"' |
| BeadPlate-class | Class '"BeadPlate"' |
| cid-method | Class '"gContainer"' |
| create.experiment.setup | Class '"gExperimentSetup"' |
| create.optimized.setup | Create optimized setup |
| dim-method | Class '"gArray"' |
| exclude<- | Class '"gContainer"' |
| exclude<--method | Class '"gContainer"' |
| gArray-class | Class '"gArray"' |
| gAssembly-class | Class '"gAssembly"' |
| gc | R data object based on example file. |
| gContainer-class | Class '"gContainer"' |
| GenotypingChip | Class '"BeadChip"' |
| get.experiment.setup | Get experiment assignment after optimization. |
| get.gAssembly-method | Class '"gContainer"' |
| get.gAssembly-method | Class '"gExperimentSetup"' |
| getLayout | Class '"gArray"' |
| getLayout-method | Class '"BeadChip"' |
| getLayout-method | Class '"MSAroboticPlate"' |
| getLayout-method | Class '"gArray"' |
| getLayout-method | Class '"gAssembly"' |
| getLayout-method | Class '"gContainer"' |
| getLayout-method | Class '"gPlate"' |
| getLayout-method | Class '"gSlide"' |
| gExperimentSetup-class | Class '"gExperimentSetup"' |
| gPlate-class | Class '"gPlate"' |
| gs | R data object based on example file. |
| gSample-class | Class 'gSample' |
| gSetup | R data object based on example file. |
| gSetup2 | R data object based on example file. |
| gSlide-class | Class '"gSlide"' |
| IlluminaBeadChip | Class '"BeadChip"' |
| IlluminaBeadChip24Plate | Class '"BeadPlate"' |
| IlluminaBeadChip48Plate | Class '"BeadPlate"' |
| IlluminaBeadChip96Plate | Class '"BeadPlate"' |
| initialize-method | Class '"MSAroboticPlate"' |
| initialize-method | Class '"gAssembly"' |
| initialize-method | Class '"gContainer"' |
| initialize-method | Class '"gExperimentSetup"' |
| initialize-method | Class '"gPlate"' |
| initialize-method | Class 'gSample' |
| initialize-method | Class '"gSlide"' |
| map.to.MSA | Class '"MSAroboticPlate"' |
| map.to.MSA-method | Class '"MSAroboticPlate"' |
| metadata | Class '"gArray"' |
| metadata-method | Class '"gArray"' |
| metadata-method | Class '"gAssembly"' |
| metadata-method | Class '"gContainer"' |
| metadata-method | Class '"gExperimentSetup"' |
| metadata<- | Class '"gArray"' |
| metadata<--method | Class '"gArray"' |
| metadata<--method | Class '"gAssembly"' |
| metadata<--method | Class '"gContainer"' |
| metadata<--method | Class '"gExperimentSetup"' |
| MSA4.plate | Class '"MSAroboticPlate"' |
| MSAroboticPlate-class | Class '"MSAroboticPlate"' |
| multi.barplot | multi.barplot |
| multi.chisq.test | multi.chisq.test |
| ncol-method | Class '"gArray"' |
| nrow-method | Class '"gArray"' |
| optimal.block | optimal.block |
| optimal.shuffle | optimal.shuffle |
| pheno | R data object based on example file. |
| plot-method | Methods for Function 'plot' |
| plot-methods | Methods for Function 'plot' |
| predefined | Show predefined objects in the package. |
| QC | QC |
| samples-method | Class '"gExperimentSetup"' |
| setup.container | Class '"gContainer"' |
| setup.sample | Class 'gSample' |
| show-method | Class '"MSAroboticPlate"' |
| show-method | Class '"gAssembly"' |
| show-method | Class '"gContainer"' |
| show-method | Class '"gExperimentSetup"' |
| show-method | Class '"gPlate"' |
| show-method | Class 'gSample' |
| show-method | Class '"gSlide"' |
| summary | Class 'gSample' |
| summary-method | Class '"gExperimentSetup"' |
| summary-method | Class 'gSample' |