Gene Expression Signature based Similarity Metric

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Documentation for package ‘GeneExpressionSignature’ version 1.36.0

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exampleSet sample data, a subset of the C-MAP
GeneExpressionSignature Introduction to the GeneExpressionSignature Package
getRLs Convert gene expression profiles to a ranked list (data preprocessing)
RankMerging Merging the ranker lists with the same labels of the biological states into a single list with the Iorio's method.
ScoreGSEA Compute pairwise distances between samples with method in package GSEA
ScorePGSEA Compute pairwise distances between samples with method in package PGSEA
SignatureDistance Compute pairwise distances comprehensively.