Identifies false positives of CNV calling tools by using SNV calls

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Documentation for package ‘CNVfilteR’ version 1.4.2

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auxAddCNcolumn auxAddCNcolumn
auxGetVcfSource auxGetVcfSource
auxProcessVariants auxProcessVariants
filterCNVs filterCNVs
getVariantScore getVariantScore
loadCNVcalls loadCNVcalls
loadSNPsFromVCF loadSNPsFromVCF
loadVCFs loadVCFs
plotAllCNVs plotAllCNVs
plotScoringModel plotVariantsForCNV
plotVariantsForCNV plotVariantsForCNV