MSstatsBioData

DOI: 10.18129/B9.bioc.MSstatsBioData    

This package is for version 3.11 of Bioconductor; for the stable, up-to-date release version, see MSstatsBioData.

Datasets of published biological studies with DDA or SRM experiments

Bioconductor version: 3.11

Provides the peak intensity data for detecting differentially abundant proteins in seven published biological investigations.

Author: Meena Choi

Maintainer: Meena Choi <mnchoi67 at gmail.com>

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MSstatsBioData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MSstatsBioData")

 

HTML	R Script	MSstatsBioData: Datasets of published biological studies with DDA or SRM experiments
PDF		Reference Manual
Text		NEWS

Details

biocViews	ExperimentData, MassSpectrometryData, Proteome
Version	1.10.0
License	Artistic-2.0
Depends	R (>= 3.4)
Imports
LinkingTo
Suggests	BiocStyle, knitr, MSstats
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me	MSstats
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	MSstatsBioData_1.10.0.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Source Repository	git clone https://git.bioconductor.org/packages/MSstatsBioData
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/MSstatsBioData
Package Short Url	https://bioconductor.org/packages/MSstatsBioData/
Package Downloads Report	Download Stats