org.Mm.eg.db

DOI: 10.18129/B9.bioc.org.Mm.eg.db    

This package is for version 3.11 of Bioconductor; for the stable, up-to-date release version, see org.Mm.eg.db.

Genome wide annotation for Mouse

Bioconductor version: 3.11

Genome wide annotation for Mouse, primarily based on mapping using Entrez Gene identifiers.

Author: Marc Carlson

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("org.Mm.eg.db")):

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("org.Mm.eg.db")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, Mus_musculus, OrgDb, mouseLLMappings
Version 3.11.4
License Artistic-2.0
Depends R (>= 2.7.0), methods, AnnotationDbi(>= 1.49.2)
Imports methods, AnnotationDbi
LinkingTo
Suggests DBI, annotate, RUnit
SystemRequirements
Enhances
URL
Depends On Me annotation, clariomsmousehttranscriptcluster.db, clariomsmousetranscriptcluster.db, illuminaMousev1.db, illuminaMousev1p1.db, illuminaMousev2.db, lumiMouseAll.db, m10kcod.db, m20kcod.db, mgu74a.db, mgu74av2.db, mgu74b.db, mgu74bv2.db, mgu74c.db, mgu74cv2.db, mguatlas5k.db, mgug4104a.db, mgug4120a.db, mgug4121a.db, mgug4122a.db, mi16cod.db, mm24kresogen.db, MmAgilentDesign026655.db, moe430a.db, moe430b.db, moex10stprobeset.db, moex10sttranscriptcluster.db, mogene10stprobeset.db, mogene10sttranscriptcluster.db, mogene11stprobeset.db, mogene11sttranscriptcluster.db, mogene20stprobeset.db, mogene20sttranscriptcluster.db, mogene21stprobeset.db, mogene21sttranscriptcluster.db, mouse4302.db, mouse430a2.db, mpedbarray.db, mta10probeset.db, mta10transcriptcluster.db, mu11ksuba.db, mu11ksubb.db, Mu15v1.db, mu19ksuba.db, mu19ksubb.db, mu19ksubc.db, Mu22v3.db, Mus.musculus, mwgcod.db, nugomm1a520177.db, RnaSeqGeneEdgeRQL
Imports Me artMS, cellity, chimeraviz, chipenrich, debrowser, eegc, EGSEA, GAPGOM, GmicR, PathwaySplice, profileplyr, Rmmquant, rTRMui, scPipe, tenXplore
Suggests Me annotate, annotatr, APAlyzer, CAGEfightR, CAGEWorkflow, CellTrails, chipenrich.data, chipseqDB, compEpiTools, csaw, csawUsersGuide, FELLA, fgsea, gCMAPWeb, gCrisprTools, GeneAnswers, geneXtendeR, GenomicFeatures, girafe, InPAS, isomiRs, karyoploteR, MLP, MmPalateMiRNA, NoRCE, ontoProc, Organism.dplyr, pathview, Pigengene, ReportingTools, restfulSE, RnBeads, RpsiXML, rrvgo, rTRM, simpleSingleCell, singleCellTK, TimeSeriesExperiment, ViSEAGO
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package org.Mm.eg.db_3.11.4.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Package Short Url https://bioconductor.org/packages/org.Mm.eg.db/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: