MafH5.gnomAD.r3.0.GRCh38

DOI: 10.18129/B9.bioc.MafH5.gnomAD.r3.0.GRCh38    

This package is for version 3.11 of Bioconductor; for the stable, up-to-date release version, see MafH5.gnomAD.r3.0.GRCh38.

Minor allele frequency data from gnomAD release 3.0 for GRCh38 stored using a HDF5 backend

Bioconductor version: 3.11

Store minor allele frequency data from the Genome Aggregation Database (gnomAD release 3.0) for the human genome version GRCh38 using a HDF5 backend.

Author: Robert Castelo

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MafH5.gnomAD.r3.0.GRCh38")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual
Text		NEWS

Details

biocViews	AnnotationData, Genetics, GenomicScores, Homo_sapiens
Version	3.11.0
License	Artistic-2.0
Depends	R (>= 3.5.0), GenomicScores(>= 1.11.7)
Imports	utils, S4Vectors, IRanges, GenomicRanges, GenomeInfoDb, BSgenome, rhdf5, HDF5Array
LinkingTo
Suggests	SNPlocs.Hsapiens.dbSNP149.GRCh38
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	MafH5.gnomAD.r3.0.GRCh38_3.11.0.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Package Short Url	https://bioconductor.org/packages/MafH5.gnomAD.r3.0.GRCh38/
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