DOI: 10.18129/B9.bioc.NCIgraph    

This package is for version 3.11 of Bioconductor; for the stable, up-to-date release version, see NCIgraph.

Pathways from the NCI Pathways Database

Bioconductor version: 3.11

Provides various methods to load the pathways from the NCI Pathways Database in R graph objects and to re-format them.

Author: Laurent Jacob

Maintainer: Laurent Jacob <laurent.jacob at>

Citation (from within R, enter citation("NCIgraph")):


To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



PDF R Script NCIgraph: networks from the NCI pathway integrated database as graphNEL objects.
PDF   Reference Manual


biocViews GraphAndNetwork, Pathways, Software
Version 1.36.0
In Bioconductor since BioC 2.8 (R-2.13) (9.5 years)
License GPL-3
Depends R (>= 2.10.0)
Imports graph, KEGGgraph, methods, RBGL, RCy3, R.methodsS3
Suggests Rgraphviz
Enhances DEGraph
Depends On Me
Imports Me DEGraph
Suggests Me DEGraph
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package NCIgraph_1.36.0.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Source Repository git clone
Source Repository (Developer Access) git clone
Package Short Url
Package Downloads Report Download Stats

Documentation »


R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: