LVSmiRNA

DOI: 10.18129/B9.bioc.LVSmiRNA    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.11 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see LVSmiRNA.

LVS normalization for Agilent miRNA data

Bioconductor version: 3.11

Normalization of Agilent miRNA arrays.

Author: Stefano Calza, Suo Chen, Yudi Pawitan

Maintainer: Stefano Calza <stefano.calza at unibs.it>

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("LVSmiRNA")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual

Details

biocViews	AgilentChip, Microarray, OneChannel, Preprocessing, Software
Version	1.38.0
In Bioconductor since	BioC 2.7 (R-2.12) (10 years)
License	GPL-2
Depends	R (>= 3.1.0), methods, splines
Imports	BiocGenerics, stats4, graphics, stats, utils, MASS, Biobase, quantreg, limma, affy, SparseM, vsn, zlibbioc
LinkingTo
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SystemRequirements
Enhances	parallel, snow, Rmpi
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
macOS 10.13 (High Sierra)
Source Repository	git clone https://git.bioconductor.org/packages/LVSmiRNA
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/LVSmiRNA
Package Short Url	https://bioconductor.org/packages/LVSmiRNA/
Package Downloads Report	Download Stats