LVSmiRNA

DOI: 10.18129/B9.bioc.LVSmiRNA    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.11 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see LVSmiRNA.

LVS normalization for Agilent miRNA data

Bioconductor version: 3.11

Normalization of Agilent miRNA arrays.

Author: Stefano Calza, Suo Chen, Yudi Pawitan

Maintainer: Stefano Calza <stefano.calza at unibs.it>

Citation (from within R, enter citation("LVSmiRNA")):

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("LVSmiRNA")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF   Reference Manual

Details

biocViews AgilentChip, Microarray, OneChannel, Preprocessing, Software
Version 1.38.0
In Bioconductor since BioC 2.7 (R-2.12) (10 years)
License GPL-2
Depends R (>= 3.1.0), methods, splines
Imports BiocGenerics, stats4, graphics, stats, utils, MASS, Biobase, quantreg, limma, affy, SparseM, vsn, zlibbioc
LinkingTo
Suggests
SystemRequirements
Enhances parallel, snow, Rmpi
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
macOS 10.13 (High Sierra)
Source Repository git clone https://git.bioconductor.org/packages/LVSmiRNA
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/LVSmiRNA
Package Short Url https://bioconductor.org/packages/LVSmiRNA/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: