BiocDockerManager

DOI: 10.18129/B9.bioc.BiocDockerManager    

This package is for version 3.11 of Bioconductor; for the stable, up-to-date release version, see BiocDockerManager.

Access Bioconductor docker images

Bioconductor version: 3.11

Package works analogous to BiocManager but for docker images. Use the BiocDockerManager package to install and manage docker images provided by the Bioconductor project. A convenient package to install images, update images and find which Bioconductor based docker images are available.

Author: Maintainer [aut, cre], Nitesh Turaga [aut]

Maintainer: Maintainer <maintainer at bioconductor.org>

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BiocDockerManager")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BiocDockerManager")

 

HTML	R Script	BiocDockerManager Vignette
PDF		Reference Manual
Text		NEWS

Details

biocViews	Infrastructure, Software, ThirdPartyClient
Version	1.0.1
In Bioconductor since	BioC 3.11 (R-4.0) (0.5 years)
License	Artistic-2.0
Depends	R (>= 4.0)
Imports	httr, whisker, readr, dplyr, utils, methods
LinkingTo
Suggests	BiocStyle, knitr, rmarkdown, testthat (>= 2.1.0)
SystemRequirements	docker
Enhances
URL
BugReports	https://github.com/nturaga/BiocDockerManager/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	BiocDockerManager_1.0.1.tar.gz
Windows Binary	BiocDockerManager_1.0.1.zip
macOS 10.13 (High Sierra)	BiocDockerManager_1.0.1.tgz
Source Repository	git clone https://git.bioconductor.org/packages/BiocDockerManager
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/BiocDockerManager
Package Short Url	https://bioconductor.org/packages/BiocDockerManager/
Package Downloads Report	Download Stats