AnalysisPageServer

DOI: 10.18129/B9.bioc.AnalysisPageServer    

This package is for version 3.11 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see AnalysisPageServer.

A framework for sharing interactive data and plots from R through the web

Bioconductor version: 3.11

AnalysisPageServer is a modular system that enables sharing of customizable R analyses via the web.

Author: Brad Friedman <friedman.brad at gene.com>, Adrian Nowicki, Hunter Whitney <hunter at hunterwhitney.com>, Matthew Brauer <brauer.matthew at gene.com>, Sara Moore, Konrad Debski

Maintainer: Brad Friedman <friedmab at gene.com>

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("AnalysisPageServer")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("AnalysisPageServer")

 

HTML	R Script	0. AnalysisPageServer
HTML	R Script	1. Making Static Content Interactive with AnalysisPageServer
HTML	R Script	2. Embedding APS datasets in other documents
HTML	R Script	3. AnalysisPageServer Interactivity
HTML	R Script	4. Non-interactive servers and Rook Deployment
HTML	R Script	5. Interactive Apps AnalysisPageServer
HTML	R Script	6. Apache Deployment
HTML	R Script	7. FastRWeb Deployment
HTML	R Script	8. Condition Trapping
HTML		8. Licenses
PDF		Reference Manual
Text		NEWS
Text		INSTALL

Details

biocViews	DataRepresentation, GUI, Software, Visualization
Version	1.21.0
In Bioconductor since	BioC 3.1 (R-3.2) (5.5 years)
License	Artistic-2.0
Depends
Imports	methods, log4r, tools, rjson, Biobase, graph
LinkingTo
Suggests	RUnit, XML, knitr
SystemRequirements
Enhances	Rook (>= 1.1), fork, FastRWeb, ggplot2
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	AnalysisPageServer_1.21.0.tar.gz
Windows Binary	AnalysisPageServer_1.21.0.zip (32- & 64-bit)
macOS 10.13 (High Sierra)
Source Repository	git clone https://git.bioconductor.org/packages/AnalysisPageServer
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/AnalysisPageServer
Package Short Url	https://bioconductor.org/packages/AnalysisPageServer/
Package Downloads Report	Download Stats