AGDEX

DOI: 10.18129/B9.bioc.AGDEX    

This package is for version 3.11 of Bioconductor; for the stable, up-to-date release version, see AGDEX.

Agreement of Differential Expression Analysis

Bioconductor version: 3.11

A tool to evaluate agreement of differential expression for cross-species genomics

Author: Stan Pounds <stanley.pounds at stjude.org>; Cuilan Lani Gao <cuilan.gao at stjude.org>

Maintainer: Cuilan lani Gao <cuilan.gao at stjude.org>

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("AGDEX")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("AGDEX")

 

PDF	R Script	AGDEX.pdf
PDF		Reference Manual

Details

biocViews	GeneExpression, Genetics, Microarray, Software
Version	1.36.0
In Bioconductor since	BioC 2.9 (R-2.14) (9 years)
License	GPL Version 2 or later
Depends	R (>= 2.10), Biobase, GSEABase
Imports	stats
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	AGDEX_1.36.0.tar.gz
Windows Binary	AGDEX_1.36.0.zip
macOS 10.13 (High Sierra)	AGDEX_1.36.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/AGDEX
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/AGDEX
Package Short Url	https://bioconductor.org/packages/AGDEX/
Package Downloads Report	Download Stats