Retrieve and analyze data from the Human Protein Atlas

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Documentation for package ‘HPAanalyze’ version 1.6.0

Help Pages

hpaDownload Download datasets
hpaExport Export the subset data
hpaListParam Subset downloaded data
hpaSubset Subset downloaded data
hpaVis Visualize data in one function
hpaVisPatho Visualize pathology data
hpaVisSubcell Visualize subcellular location data
hpaVisTissue Visualize tissue data
hpaXml Extract details about an individual protein from XML file in one function
hpaXmlAntibody Extract antibody information
hpaXmlGet Download and import xml file
hpaXmlProtClass Extract protein classes
hpaXmlTissueExpr Extract tissue expression details
hpaXmlTissueExprSum Extract tissue expression and download images
hpa_downloaded_histology_v18 HPA histology dataset version 18
hpa_histology_data HPA histology dataset