Changes in version 1.10.1 * Added a pkgdown website Changes in version 1.8.1 * Exported inverseList function * Improved spelling * Corrected a bug related to logical coercion of length greater than 1. Changes in version 1.6.1 * Corrected an empty condition in mclusterGeneSim * Corrected a logical check in mclusterSim * Improved coherence in the output between lists and GeneSetCollections * Added links between vignettes Changes in version 1.5.4 * Improved spelling * Reduced the complexity fo combineScoresPar and combineScores. * Improve efficiency of code in vignettes. * Change the news section * Adding a section about GeneOverlap package. * Changed the License Changes in version 1.3.3 * Add methods for GeneSetCollections Changes in version 1.1.12 * Improve speed on geneSim and clusterSim * Add a vignette describing more uses of BioCor * Adding more tests * Calculating similarities correctly when non-existent genes are provided. Changes in version 1.1.4 * Correct incorrect implementation of rcmax method Changes in version 1.1.3 * Improving reciprocal method * Increased testind of combineScores Changes in version 1.1.0 * Adding combineScoresPar for high number of comparisons * Improving the speed of mpathSim * Removing the dependency of graph Changes in version 0.99.33 * Add more test to increase coverage * Document better the BiocViews. Changes in version 0.99.32 * Accept named pathways in mpathSim * Accept named genes in mgeneSim * diceSim returns NA when not able to calculate similarities * Increase test coverage Changes in version 0.99.31 * Refer to weighted.mean in weighted help page * Change the default behaviour of mpathSim: now methods is NULL * Correct the misleading use of geneSetsCollection. * Add test for when large number of pathways are needed (pathSims_matrix) Changes in version 0.99.30 * Add reciprocal method to combineScores Changes in version 0.99.30 * Update documentation of combineScores Changes in version 0.99.29 * Update documentation of combineScores Changes in version 0.99.28 * Update documentation of combineScores Changes in version 0.99.27 * Correct a test for clusterSim Changes in version 0.99.26 * Update the required R version from 3.3 to 3.4's * Adding more tests to increase the coverage * Using mpathSim to calculate path similarities Changes in version 0.99.25 * Update Vignette to just output html Changes in version 0.99.24 * Submit the package to the Bioconductor project Changes in version 0.99.23 * Add the Bioconductor webhook