RNASequenceTrack {RNAmodR}R Documentation

RNASequenceTrack

Description

A Gviz compatible SequenceTrack for showing RNA sequences.

Usage

RNASequenceTrack(sequence, chromosome, genome, ...)

Arguments

sequence

A character vector or RNAString object of length one. The sequence to display. See SequenceTrack.

chromosome, genome, ...

See SequenceTrack.

Value

a RNASequenceTrack object

Examples

seq <- RNAStringSet(c(chr1 = "AGCUAGCUAGCUAGCUAGCUAGCU"))
st <- RNASequenceTrack(seq)
Gviz::plotTracks(st, chromosome = "chr1",from = 1L, to = 20L)

[Package RNAmodR version 1.0.2 Index]