import_Omnipath_complexes {OmnipathR}R Documentation

Import Omnipath Complexes

Description

imports the complexes stored in Omnipath database from http://omnipathdb.org/complexes

Usage

import_Omnipath_complexes(
  from_cache_file = NULL,
  filter_databases = get_complexes_databases()
)

Arguments

from_cache_file

path to an earlier data file

filter_databases

complexes not reported in these databases are removed. See get_complexes_databases for more information.

Value

A dataframe containing information about complexes

See Also

get_complexes_databases

Examples

complexes = import_Omnipath_complexes(filter_databases=c("CORUM", "hu.MAP"))

[Package OmnipathR version 1.0.1 Index]