ptms_graph {OmnipathR}R Documentation

Post-translational modifications (PTMs) graph

Description

transforms the ptms interactions data.frame to igraph object

Usage

ptms_graph(ptms)

Arguments

ptms

data.frame created by import_Omnipath_PTMS

Value

An igraph object

See Also

import_Omnipath_PTMS

Examples

ptms = import_Omnipath_PTMS(filter_databases=c("PhosphoSite", "Signor"))
ptms_g = ptms_graph(ptms = ptms )

[Package OmnipathR version 1.0.1 Index]