import_miRNAtarget_Interactions {OmnipathR} | R Documentation |
Imports the dataset from: http://omnipathdb.org/interactions?datasets=mirnatarget, which contains miRNA-mRNA and TF-miRNA interactions
import_miRNAtarget_Interactions( from_cache_file = NULL, filter_databases = get_interaction_databases() )
from_cache_file |
path to an earlier data file |
filter_databases |
interactions not reported in these databases are
removed. See |
A dataframe containing miRNA-mRNA and TF-miRNA interactions
get_interaction_databases,
import_AllInteractions
interactions <- import_miRNAtarget_Interactions(filter_databases=c("miRTarBase", "miRecords"))