printPath_es {OmnipathR}R Documentation

print network paths given by edge sequence

Description

prints the interactions in the path in a nice format

Usage

printPath_es(edgeSeq, G)

Arguments

edgeSeq

edge sequence

G

igraph object (from ptms or any interaction dataset)

Value

Interactions displayed in a nice format

See Also

printPath_vs

Examples

interactions = import_Omnipath_Interactions(filter_databases=c("SignaLink3"))
OPI_g = interaction_graph(interactions = interactions )
printPath_es(shortest_paths(OPI_g,from = "TYRO3",to = "STAT3", 
    output = 'epath')$epath[[1]],OPI_g)

[Package OmnipathR version 1.0.1 Index]