save.experiment {ORFik} | R Documentation |
experiment
to discSave experiment
to disc
save.experiment(df, file)
df |
an ORFik |
file |
name of file to save df as |
NULL (experiment save only)
Other ORFik_experiment:
bamVarName()
,
create.experiment()
,
experiment-class
,
libraryTypes()
,
outputLibs()
,
read.experiment()
,
validateExperiments()
# 1. Pick directory dir <- system.file("extdata", "", package = "ORFik") # 2. Pick an experiment name exper <- "ORFik" # 3. Pick .gff/.gtf location txdb <- system.file("extdata", "annotations.gtf", package = "ORFik") template <- create.experiment(dir = dir, exper, txdb = txdb, viewTemplate = FALSE) template$X5[6] <- "heart" # <- fix non unique row # read experiment df <- read.experiment(template) # Save with: save.experiment(df, file = "path/to/save/experiment.csv")