remove.experiments {ORFik}R Documentation

Remove bam/bed/wig files load in R as variables

Description

Variable names defined by df, in envir defined

Usage

remove.experiments(df, envir = .GlobalEnv)

Arguments

df

an ORFik experiment

envir

environment to save to, default (.GlobalEnv)

Value

NULL (objects removed from envir specified)

Examples

# 1. Pick directory
dir <- system.file("extdata", "", package = "ORFik")
# 2. Pick an experiment name
exper <- "ORFik"
# 3. Pick .gff/.gtf location
txdb <- system.file("extdata", "annotations.gtf", package = "ORFik")
template <- create.experiment(dir = dir, exper, txdb = txdb,
                              viewTemplate = FALSE)
template$X5[6] <- "heart" # <- fix non unique row
# read experiment
df <- read.experiment(template)
# Output to .GlobalEnv with:
# outputLibs(df)
# Then remove them with: remove.experiments(df)

[Package ORFik version 1.6.9 Index]