straightRowLines {CONFESS}R Documentation

straightRowLines

Description

It identifies the horizontal BF image characteristic lines.

Usage

straightRowLines(colData, pattern.search, ImgLimits)

Arguments

colData

List. The data to be analyzed.

pattern.search

Integer. A cutoff to find horizontal and vertical lines on the chip

ImgLimits

Integer. It instructs the algorithm to find spots in a certain central image area. For example, for a 512 x 512 image with cutSides = 50, it will search for spots in the central area [ImgLimits:(512-ImgLimits),ImgLimits:(512-ImgLimits)] of the image matrix.

Value

The estimated horizontal BF characteristic lines


[Package CONFESS version 1.14.0 Index]