deco-package |
DECO: DEcomposing heterogeneous Cohorts from Omic profiling. |
ALCLdata |
Subset of microarray gene expression data from Anaplastic Large Cell Leukemia disease. |
AnnotateDECO |
DECO annotating function |
deco |
DECO: DEcomposing heterogeneous Cohorts from Omic profiling. |
deco-class |
Class '"deco"' |
decoNSCA |
Non-Symmetrical Correspondence Analysis (NSCA) applied to a subsampled dataset |
decoRDA |
Subsampling function to find out differential events along samples from an omic dataset |
decoReport |
Report of DECO analyisis |
featureTable |
Accessor to 'featureTable' slot of 'deco-class' objects. |
featureTable-method |
Class '"deco"' |
NSCAcluster |
Accessor to 'NSCAcluster' slot of 'deco-class' objects. |
NSCAcluster-method |
Class '"deco"' |
plotAssociationH |
Plot to visualize association among DECO subclasses and sample information (phenotype). |
plotDECOProfile |
Feature profile from DECO analysis |
plotGainingH |
Gaining plots for using h-statistic instead original omic data. |
plotHeatmapH |
Heatmap corresponding to h-statistic matrix provided by DECO analysis. |
show-method |
Class '"deco"' |
summary-method |
Class '"deco"' |