CTDquerier-package | Package for CTDbase data query, data visualization and data analysis. |
CTDdata | Class CTDdata |
CTDdata-class | Class CTDdata |
CTDquerier | Package for CTDbase data query, data visualization and data analysis. |
download_ctd_chem | Function to download checmicals available in CTDbase |
download_ctd_dise | Function to download diseases available in CTDbase |
download_ctd_genes | Function to download genes available in CTDbase |
enrich | Method to perform enrichment analysis using two 'CTDdata' objects |
enrich-method | Class CTDdata |
gala | 'CTDdata' for ilustrative purpouses |
get_table | Method to obtain a specific inner table from a 'CTDdata' object. |
get_table-method | Class CTDdata |
get_terms | Getter to obtain the terms used to perform a query into CTDbase |
get_terms-method | Class CTDdata |
leaf_plot | Function to create a leaf plot |
load_ctd_chem | Function to load the '.tsv.gz' file for chemicals |
load_ctd_dise | Function to load the '.tsv.gz' file for disease |
load_ctd_gene | Function to load the '.tsv.gz' file for genes |
plot-method | Class CTDdata |
query_ctd_chem | Function to query CTDbase using chemical terminology ( Chemical Name ) |
query_ctd_dise | Function to query CTDbase using disease terminology |
query_ctd_gene | Function to query CTDbase using gene terminology ( Gene Symbol ) |