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To install this package, start R and enter:
## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("DmelSGI")
In most cases, you don't need to download the package archive at all.
DmelSGI
Experimental data and documented source code for the paper "A Map of Directional Genetic Interactions in a Metazoan Cell"
Bioconductor version: 3.1
The package contains the experimental data and documented source code of the manuscript "Fischer et al., A Map of Directional Genetic Interactions in a Metazoan Cell, eLife, 2015, in Press.". The vignette code generates all figures in the paper.
Author: Bernd Fischer
Maintainer: Bernd Fischer <b.fischer at dkfz.de>
Citation (from within R,
enter citation("DmelSGI")):
Installation
To install this package, start R and enter:
## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("DmelSGI")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("DmelSGI")
| R Script | DmelSGI | |
| Reference Manual |
Details
| biocViews | CellCulture, Drosophila_melanogaster_Data, ExperimentData, HighThroughputImagingData, MicrotitrePlateAssayData |
| Version | 1.0.0 |
| License | Artistic-2.0 |
| Depends | R (>= 3.0) |
| Imports | grid, TSP, limma, rhdf5, knitr, abind, gplots, igraph |
| LinkingTo | |
| Suggests | BiocStyle, EBImage, RColorBrewer, RNAinteractMAPK, RSVGTipsDevice, cgdsr, hwriter, xtable, beeswarm |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | DmelSGI_1.0.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.6 (Snow Leopard) | |
| Mac OS X 10.9 (Mavericks) | |
| Subversion source | (username/password: readonly) |
| Package Short Url | http://bioconductor.org/packages/DmelSGI/ |
| Package Downloads Report | Download Stats |
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